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PaDEL-Descriptor is designed as a handy utility that can help you perform molecular calculations.
PaDEL-Descriptor manages to calculate 863 descriptors (729 1D, 2D descriptors and 134 3D descriptors) and 10 types of fingerprints.
Requirements:
· Java
What's New in This Release: [ read full changelog ]
· Bug fixes for mol2 files.
· Added option to restrict maximum descriptor calculation time for a molecule.
· Developed KNIME nodes for PaDEL-Descriptor.
· Updated CDK library to 1.4.15.

Via: PaDEL-Descriptor 2.14