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PeptideShaker is a powerful application designed to help view the results of a peptide and protein identification process. The program can provide you with detailed information about the 3D structure and the modifications of your project.
The main advantage of the program is that it can be used on any operating system and that it supports the Mascot, OMSSA and X!Tandem search engines.
Requirements:
· Java
What's New in This Release: [ read full changelog ]
· BUG FIX: Had to (temporarily) disabled the new improved PTM location code as could result in null pointers.
· LIBRARY UPDATE: Upd ated mascotdatfile to version 3.4.2, such that the Mascot search results can be loaded again.
· LIBRARY UPDATE: Updated utilities to version 3.8.9, fixing an issues with the EBI proxy settings.

Via: PeptideShaker 0.18.2